EnhancerDB
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  3. rs563034402[chr1:29255742]
Enhancers that have rs563034402[chr1:29255742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29250005 29257455 enh42916
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Liver Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Adrenal Uterus Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs563034402[chr1:29255742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29255727 29255742 HNF1A JASPAR yes 27790965
chr1 29255728 29255749 IRF1 JASPAR yes 27790966
chr1 29255733 29255743 HOXD11 JASPAR yes 27790967
chr1 29255733 29255744 HOXC12 JASPAR yes 27790968
chr1 29255740 29255744 YY1 TRANSFAC yes 27790969
chr1 29255741 29255756 FOXP1 JASPAR yes 27790970
chr1 29255742 29255757 FOXP1 JASPAR yes 27790971
Genes associated with rs563034402[chr1:29255742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More