EnhancerDB
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  3. rs563048976[chr1:27887038]
Enhancers that have rs563048976[chr1:27887038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs563048976[chr1:27887038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27887027 27887038 E2F6 JASPAR yes 27709076
chr1 27887028 27887049 ZNF263 JASPAR yes 27709077
chr1 27887029 27887044 NR2C2 JASPAR yes 27709078
chr1 27887029 27887050 ZNF263 JASPAR yes 27709079
chr1 27887031 27887042 E2F6 JASPAR yes 27709080
chr1 27887032 27887053 ZNF263 JASPAR yes 27709081
chr1 27887034 27887042 TBX15 JASPAR yes 27709082
Genes associated with rs563048976[chr1:27887038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More