EnhancerDB
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  3. rs563055220[chr17:10023297]
Enhancers that have rs563055220[chr17:10023297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr17 10023147 10023510 vista23985
VISTA
Transcript factors that have rs563055220[chr17:10023297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10023108 10023411 CTCF UCSC Txn Factor no Conserved 108239069
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742901
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239070
chr17 10023123 10023336 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742902
chr17 10023123 10023336 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239071
chr17 10023123 10023336 ZNF217 UCSC Txn Factor no Conserved 108239072
chr17 10023128 10023452 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108239073
chr17 10023139 10023409 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742903
chr17 10023139 10023409 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239074
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742904
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239075
chr17 10023209 10023382 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742905
chr17 10023209 10023382 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239076
chr17 10023244 10023322 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742906
chr17 10023244 10023322 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239077
chr17 10023260 10023363 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108239078
Genes associated with rs563055220[chr17:10023297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More