EnhancerDB
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  3. rs563153001[chr6:36539348]
Enhancers that have rs563153001[chr6:36539348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36532405 36555595 enh23192
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs563153001[chr6:36539348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36539336 36539357 IRF1 JASPAR yes 101344732
chr6 36539338 36539353 PRDM1 JASPAR yes 101344734
chr6 36539338 36539359 IRF1 JASPAR yes 101344735
chr6 36539341 36539351 GABPA JASPAR yes 101344736
chr6 36539341 36539354 ELF1 JASPAR yes 101344737
chr6 36539341 36539355 SPI1 JASPAR yes 101344738
chr6 36539341 36539355 SPIC JASPAR yes 101344739
chr6 36539342 36539363 IRF1 JASPAR yes 101344740
chr6 36539344 36539349 ETS2 TRANSFAC yes 101344741
chr6 36539346 36539361 FOXP1 JASPAR yes 101344742
chr6 36539347 36539362 FOXP1 JASPAR yes 101344743
chr6 36539348 36539363 FOXP1 JASPAR yes 101344744
Genes associated with rs563153001[chr6:36539348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More