EnhancerDB
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  3. rs563172989[chr3:185818060]
Enhancers that have rs563172989[chr3:185818060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185808545 185825535 enh7742
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs563172989[chr3:185818060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185818051 185818066 NFYB JASPAR yes 8312206
chr3 185818051 185818069 RARA JASPAR yes 8312207
chr3 185818053 185818069 NFYA JASPAR yes 8312210
chr3 185818056 185818072 SOX4 JASPAR yes 8312211
chr3 185818057 185818072 SOX21 JASPAR yes 8312212
chr3 185818057 185818073 SOX4 JASPAR yes 8312213
chr3 185818058 185818062 H1TF2 TRANSFAC yes 8312214
chr3 185818058 185818062 NFE TRANSFAC yes 8312215
chr3 185818058 185818062 SRF TRANSFAC yes 8312216
Genes associated with rs563172989[chr3:185818060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More