EnhancerDB
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  3. rs563217778[chr1:229271530]
Enhancers that have rs563217778[chr1:229271530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs563217778[chr1:229271530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229269674 229274777 ZNF274 GTRD no Liver (HepG2) 21390264
chr1 229270118 229271800 ZNF143 GTRD no Epithelial (MCF-7) 21390268
chr1 229270293 229271794 ZNF274 GTRD no Liver (HepG2) 21390271
chr1 229270302 229272010 ZNF274 GTRD no Liver (HepG2) 21390272
chr1 229270321 229274409 ZNF274 GTRD no Liver (HepG2) 21390273
chr1 229270322 229271908 ZNF274 GTRD no Liver (HepG2) 21390274
chr1 229270335 229271881 ZNF274 GTRD no Liver (HepG2) 21390275
chr1 229270346 229271939 ZNF274 GTRD no Liver (HepG2) 21390277
chr1 229270363 229271530 ZNF274 GTRD no Liver (HepG2) 21390280
chr1 229270369 229272013 ZNF274 GTRD no Liver (HepG2) 21390282
chr1 229270392 229271603 ZNF143 GTRD no Epithelial (MCF-7) 21390283
chr1 229270395 229271824 ZNF143 GTRD no Epithelial (MCF-7) 21390284
chr1 229270398 229272460 ZNF274 GTRD no Liver (HepG2) 21390285
chr1 229270402 229271558 ZNF274 GTRD no Liver (HepG2) 21390286
chr1 229270403 229271540 ZNF274 GTRD no Liver (HepG2) 21390287
chr1 229270405 229271887 ZNF143 GTRD no Epithelial (MCF-7) 21390288
chr1 229270408 229271543 ZNF274 GTRD no Liver (HepG2) 21390290
chr1 229270409 229271574 ZNF143 GTRD no Epithelial (MCF-7) 21390291
chr1 229270422 229271771 ZNF274 GTRD no Liver (HepG2) 21390293
chr1 229270427 229271809 ZNF143 GTRD no Epithelial (MCF-7) 21390296
chr1 229270432 229272516 ZNF143 GTRD no Epithelial (MCF-7) 21390298
chr1 229270433 229271689 ZNF274 GTRD no Liver (HepG2) 21390299
chr1 229270435 229271797 ZNF274 GTRD no Liver (HepG2) 21390300
chr1 229270437 229271534 ZNF274 GTRD no Cervix (HeLa-S3) 21390301
chr1 229270437 229272505 ZNF143 GTRD no Epithelial (MCF-7) 21390302
chr1 229270443 229272187 ZNF274 GTRD no Liver (HepG2) 21390303
chr1 229270453 229271821 ZNF143 GTRD no Epithelial (MCF-7) 21390305
chr1 229270457 229271870 ZNF274 GTRD no Liver (HepG2) 21390306
chr1 229270472 229271559 ZNF274 GTRD no Liver (HepG2) 21390307
chr1 229270544 229271860 ZNF143 GTRD no Epithelial (MCF-7) 21390309
chr1 229270582 229271738 ZNF274 GTRD no Liver (HepG2) 21390310
chr1 229270594 229271786 ZNF143 GTRD no Epithelial (MCF-7) 21390312
chr1 229270609 229272451 ZNF143 GTRD no Epithelial (MCF-7) 21390315
chr1 229270624 229271568 ZNF274 GTRD no Liver (HepG2) 21390317
chr1 229270634 229271903 ZBTB33 GTRD no Brain (SK-N-SH) 21390318
chr1 229270645 229272187 ZBTB33 GTRD no Brain (SK-N-SH) 21390320
chr1 229270655 229271951 ZBTB33 GTRD no Brain (SK-N-SH) 21390322
chr1 229270695 229271897 ZNF143 GTRD no Epithelial (MCF-7) 21390325
chr1 229270760 229271761 ZNF274 GTRD no Cervix (HeLa-S3) 21390328
chr1 229270764 229271592 ZBTB33 GTRD no Brain (SK-N-SH) 21390330
chr1 229270795 229272152 ZNF143 GTRD no Epithelial (MCF-7) 21390333
chr1 229270796 229271596 ZBTB33 GTRD no Brain (SK-N-SH) 21390334
chr1 229270849 229272122 ZNF143 GTRD no Epithelial (MCF-7) 21390340
chr1 229270856 229271946 ZNF143 GTRD no Epithelial (MCF-7) 21390341
chr1 229270913 229271838 ZNF274 GTRD no Liver (HepG2) 21390343
chr1 229270946 229272078 ZNF274 GTRD no Cervix (HeLa-S3) 21390349
chr1 229270950 229271790 ZBTB33 GTRD no Brain (SK-N-SH) 21390350
chr1 229271237 229271900 ZNF143 GTRD no Epithelial (MCF-7) 21390353
chr1 229271303 229271836 ZNF274 GTRD no Cervix (HeLa-S3) 21390355
chr1 229271334 229272295 ZNF274 GTRD no Liver (HepG2) 21390356
chr1 229271358 229271845 ZNF143 GTRD no Epithelial (MCF-7) 21390357
chr1 229271395 229272278 ZNF143 GTRD no Epithelial (MCF-7) 21390358
chr1 229271396 229272036 ZNF143 GTRD no Epithelial (MCF-7) 21390359
chr1 229271412 229271860 ZNF274 GTRD no Liver (HepG2) 21390360
chr1 229271412 229274512 AR GTRD no Prostate (PC-3) 21390361
chr1 229271425 229272165 ZNF274 GTRD no Cervix (HeLa-S3) 21390362
chr1 229271430 229272021 ZNF274 GTRD no Cervix (HeLa-S3) 21390363
chr1 229271441 229271948 ZNF274 GTRD no Cervix (HeLa-S3) 21390364
chr1 229271444 229272464 ZNF274 GTRD no Liver (HepG2) 21390365
chr1 229271452 229273415 ZNF274 GTRD no Liver (HepG2) 21390366
chr1 229271453 229271676 ZNF274 GTRD no Liver (HepG2) 21390367
chr1 229271453 229272660 ZNF274 GTRD no Liver (HepG2) 21390368
chr1 229271458 229272159 ZNF274 GTRD no Cervix (HeLa-S3) 21390369
chr1 229271487 229272070 ZNF143 GTRD no Epithelial (MCF-7) 21390370
chr1 229271506 229271799 ZNF274 GTRD no Liver (HepG2) 21390371
chr1 229271512 229271823 ZNF143 GTRD no Epithelial (MCF-7) 21390372
chr1 229271522 229271957 ZNF274 GTRD no Cervix (HeLa-S3) 21390373
chr1 229271526 229271539 NFKB2 JASPAR yes 35965414
chr1 229271527 229271537 NFKB1 JASPAR yes 35965415
chr1 229271527 229271538 NFKB1 JASPAR yes 35965416
Genes associated with rs563217778[chr1:229271530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More