EnhancerDB
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  3. rs563227413[chr19:2600466]
Enhancers that have rs563227413[chr19:2600466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2585524 2605695 enh17851
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs563227413[chr19:2600466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 21837522
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 108362976
chr19 2600458 2600468 NFIA JASPAR yes 112080855
chr19 2600460 2600466 NFIC JASPAR yes 112080856
chr19 2600461 2600482 IRF1 JASPAR yes 112080857
chr19 2600463 2600484 IRF1 JASPAR yes 112080858
chr19 2600464 2600468 YY1 TRANSFAC yes 112080859
chr19 2600464 2600479 FOXP1 JASPAR yes 112080860
chr19 2600464 2600485 IRF1 JASPAR yes 112080861
chr19 2600465 2600480 FOXP1 JASPAR yes 112080862
chr19 2600465 2600486 IRF1 JASPAR yes 112080863
chr19 2600466 2600481 FOXP1 JASPAR yes 112080864
chr19 2600466 2600487 IRF1 JASPAR yes 112080865
Genes associated with rs563227413[chr19:2600466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More