EnhancerDB
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  3. rs563240560[chr1:25047743]
Enhancers that have rs563240560[chr1:25047743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563240560[chr1:25047743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25047729 25047744 MEF2A JASPAR yes 27522896
chr1 25047730 25047745 MEF2C JASPAR yes 27522897
chr1 25047731 25047743 MEF2A JASPAR yes 27522898
chr1 25047731 25047743 MEF2B JASPAR yes 27522899
chr1 25047731 25047743 MEF2D JASPAR yes 27522900
Genes associated with rs563240560[chr1:25047743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More