EnhancerDB
  1. Home
  2. SNP
  3. rs56325078[chr17:73338383]
Enhancers that have rs56325078[chr17:73338383]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73329469 73350521 enh4601
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs56325078[chr17:73338383]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73337700 73339245 TCF7L2 GTRD no Colon (HCT116) 21787751
chr17 73337700 73339245 TCF7L2 GTRD no Colon (HCT116) 108294026
chr17 73337750 73338468 ZNF274 GTRD no Bone Marrow (K562) 21787752
chr17 73337750 73338468 ZNF274 GTRD no Bone Marrow (K562) 108294027
chr17 73337900 73339295 TCF7L2 GTRD no Colon (HCT116) 21787753
chr17 73337900 73339295 TCF7L2 GTRD no Colon (HCT116) 108294028
chr17 73337912 73339383 TCF7L2 GTRD no Colon (HCT116) 21787754
chr17 73337912 73339383 TCF7L2 GTRD no Colon (HCT116) 108294029
chr17 73338378 73338388 MSC JASPAR yes 55945495
Genes associated with rs56325078[chr17:73338383], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More