EnhancerDB
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  3. rs563278544[chr1:55431972]
Enhancers that have rs563278544[chr1:55431972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs563278544[chr1:55431972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55431671 55432047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805411
chr1 55431695 55431995 NFYB UCSC Txn Factor no Conserved 107805413
chr1 55431695 55431995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805414
chr1 55431713 55431976 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805416
chr1 55431972 55431984 YY1 JASPAR yes 29011481
Genes associated with rs563278544[chr1:55431972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More