EnhancerDB
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  3. rs563300073[chr1:234792860]
Enhancers that have rs563300073[chr1:234792860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 234792654 234793437 vista5626
VISTA
Transcript factors that have rs563300073[chr1:234792860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234792414 234793064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395552
chr1 234792414 234793064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881372
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234792619 234793149 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395553
chr1 234792619 234793149 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881375
chr1 234792643 234793099 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395554
chr1 234792643 234793099 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881376
chr1 234792644 234793160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395555
chr1 234792644 234793160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881377
chr1 234792689 234793193 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395556
chr1 234792689 234793193 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881378
chr1 234792695 234793059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395557
chr1 234792695 234793059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881379
chr1 234792709 234793079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395558
chr1 234792709 234793079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881380
chr1 234792756 234793266 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395559
chr1 234792756 234793266 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881381
chr1 234792757 234793127 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395560
chr1 234792757 234793127 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881382
chr1 234792799 234793195 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395561
chr1 234792799 234793195 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881383
chr1 234792801 234793065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395562
chr1 234792801 234793065 CEBPB UCSC Txn Factor no Conserved 107881384
chr1 234792801 234793065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881385
chr1 234792822 234793362 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107881386
chr1 234792823 234793183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395563
chr1 234792823 234793183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881387
chr1 234792823 234793309 MYC UCSC Txn Factor no Conserved 107881388
chr1 234792829 234793219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21395564
chr1 234792829 234793219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881389
chr1 234792831 234793207 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395565
chr1 234792831 234793207 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881390
chr1 234792843 234793359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395566
chr1 234792843 234793359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881391
chr1 234792850 234792865 STAT2 JASPAR yes 36299557
chr1 234792850 234792865 STAT2 JASPAR yes 118484248
chr1 234792851 234792865 STAT1 JASPAR yes 36299558
chr1 234792851 234792865 STAT1 JASPAR yes 118484249
chr1 234792860 234792875 TFAP2A JASPAR yes 36299559
chr1 234792860 234792875 TFAP2A JASPAR yes 118484250
Genes associated with rs563300073[chr1:234792860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More