EnhancerDB
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  3. rs56331109[chr17:64544563]
Enhancers that have rs56331109[chr17:64544563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr17 64544411 64544774 vista25601
VISTA
Transcript factors that have rs56331109[chr17:64544563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64544252 64544662 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21781845
chr17 64544252 64544662 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108284961
chr17 64544331 64544587 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21781847
chr17 64544331 64544587 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108284963
chr17 64544517 64544901 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21781848
chr17 64544517 64544901 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108284964
chr17 64544555 64544569 XBP1 JASPAR yes 21277708
chr17 64544555 64544569 XBP1 JASPAR yes 55447338
chr17 64544556 64544570 CREB3L1 JASPAR yes 21277709
chr17 64544556 64544570 CREB3L1 JASPAR yes 55447339
Genes associated with rs56331109[chr17:64544563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More