EnhancerDB
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  3. rs563323535[chr17:40401956]
Enhancers that have rs563323535[chr17:40401956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs563323535[chr17:40401956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40401950 40401958 MEIS2 JASPAR yes 54289441
chr17 40401950 40401958 MEIS3 JASPAR yes 54289442
chr17 40401951 40401963 PKNOX1 JASPAR yes 54289443
chr17 40401951 40401963 PKNOX2 JASPAR yes 54289444
chr17 40401951 40401963 TGIF1 JASPAR yes 54289445
chr17 40401951 40401963 TGIF2 JASPAR yes 54289446
Genes associated with rs563323535[chr17:40401956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More