EnhancerDB
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  3. rs563332606[chr6:30716242]
Enhancers that have rs563332606[chr6:30716242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 30716024 30716359 vista51527
VISTA
Transcript factors that have rs563332606[chr6:30716242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30716240 30716248 GATA3 JASPAR yes 70343691
chr6 30716240 30716248 GATA5 JASPAR yes 70343692
chr6 30716240 30716248 GATA3 JASPAR yes 101043731
chr6 30716240 30716248 GATA5 JASPAR yes 101043732
Genes associated with rs563332606[chr6:30716242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More