EnhancerDB
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  3. rs563352729[chr10:21620566]
Enhancers that have rs563352729[chr10:21620566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21614165 21633695 enh13039
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs563352729[chr10:21620566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21620555 21620567 YY1 JASPAR yes 125897196
chr10 21620563 21620578 FOXP1 JASPAR yes 125897197
chr10 21620564 21620579 FOXP1 JASPAR yes 125897198
chr10 21620565 21620571 TBP TRANSFAC yes 125897199
chr10 21620565 21620580 FOXP1 JASPAR yes 125897200
chr10 21620565 21620586 IRF1 JASPAR yes 125897201
chr10 21620566 21620581 FOXP1 JASPAR yes 125897202
chr10 21620566 21620587 IRF1 JASPAR yes 125897203
Genes associated with rs563352729[chr10:21620566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More