EnhancerDB
  1. Home
  2. SNP
  3. rs563401846[chr17:41398501]
Enhancers that have rs563401846[chr17:41398501]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41397773 41404212 enh48037
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (OCI-LY7) Stomach Muscle (A673) Breast Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs563401846[chr17:41398501]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41398482 41398503 IRF1 JASPAR yes 54334582
chr17 41398483 41398504 IRF1 JASPAR yes 54334584
chr17 41398484 41398505 IRF1 JASPAR yes 54334586
chr17 41398485 41398506 IRF1 JASPAR yes 54334588
chr17 41398486 41398501 FOXP1 JASPAR yes 54334589
chr17 41398486 41398507 IRF1 JASPAR yes 54334590
chr17 41398487 41398502 FOXP1 JASPAR yes 54334591
chr17 41398487 41398508 IRF1 JASPAR yes 54334592
chr17 41398488 41398503 FOXP1 JASPAR yes 54334593
chr17 41398488 41398509 IRF1 JASPAR yes 54334594
chr17 41398489 41398504 FOXP1 JASPAR yes 54334595
chr17 41398491 41398506 FOXP1 JASPAR yes 54334596
chr17 41398491 41398512 IRF1 JASPAR yes 54334597
chr17 41398501 41398516 AR JASPAR yes 54334598
Genes associated with rs563401846[chr17:41398501], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More