EnhancerDB
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  3. rs563406242[chr5:172162148]
Enhancers that have rs563406242[chr5:172162148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563406242[chr5:172162148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172162147 172162151 LFA1 TRANSFAC yes 67819679
chr5 172162148 172162157 SNAI2 JASPAR yes 67819680
chr5 172162148 172162158 HEY2 JASPAR yes 67819681
chr5 172162148 172162158 ID4 JASPAR yes 67819682
chr5 172162148 172162158 TCF4 JASPAR yes 67819683
Genes associated with rs563406242[chr5:172162148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More