EnhancerDB
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  3. rs563429716[chr1:178025199]
Enhancers that have rs563429716[chr1:178025199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs563429716[chr1:178025199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178024979 178025359 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352411
chr1 178025050 178025514 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21352412
chr1 178025080 178025536 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352413
chr1 178025095 178025375 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352414
chr1 178025114 178025384 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352415
chr1 178025123 178025353 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352416
chr1 178025123 178025413 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352417
chr1 178025127 178025417 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21352418
chr1 178025135 178025405 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21352419
chr1 178025181 178025309 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352420
chr1 178025188 178025207 CTCF JASPAR yes 33390263
Genes associated with rs563429716[chr1:178025199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More