EnhancerDB
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  3. rs563478835[chr16:89551533]
Enhancers that have rs563478835[chr16:89551533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563478835[chr16:89551533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89551532 89551550 IRF2 JASPAR yes 12349870
chr16 89551533 89551554 IRF1 JASPAR yes 12349871
Genes associated with rs563478835[chr16:89551533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More