EnhancerDB
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  3. rs563499011[chr16:85361424]
Enhancers that have rs563499011[chr16:85361424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563499011[chr16:85361424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85360070 85362286 ZNF143 GTRD no Epithelial (MCF-7) 21723639
chr16 85360090 85362310 ZNF143 GTRD no Epithelial (MCF-7) 21723640
chr16 85360101 85362374 ZNF143 GTRD no Epithelial (MCF-7) 21723642
chr16 85360640 85362728 ZNF274 GTRD no Bone Marrow (K562) 21723650
chr16 85361183 85361623 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723654
chr16 85361188 85361923 TCF7L2 GTRD no Colon (HCT116) 21723655
chr16 85361222 85361612 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723656
chr16 85361247 85362329 TCF7L2 GTRD no Colon (HCT116) 21723657
chr16 85361248 85361538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723658
chr16 85361278 85361764 ZNF143 GTRD no Epithelial (MCF-7) 21723659
chr16 85361279 85362322 TCF7L2 GTRD no Colon (HCT116) 21723660
chr16 85361307 85362241 TCF7L2 GTRD no Colon (HCT116) 21723661
chr16 85361312 85362439 ZNF274 GTRD no Bone Marrow (K562) 21723662
chr16 85361314 85362285 ZNF274 GTRD no Liver (HepG2) 21723663
chr16 85361338 85361688 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723664
chr16 85361415 85361429 EBF1 JASPAR yes 12048037
chr16 85361416 85362387 TCF7L2 GTRD no Colon (HCT116) 21723665
chr16 85361419 85362495 ZNF274 GTRD no Bone Marrow (K562) 21723666
Genes associated with rs563499011[chr16:85361424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More