EnhancerDB
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  3. rs563516190[chr17:73344951]
Enhancers that have rs563516190[chr17:73344951]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73329469 73350521 enh4601
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs563516190[chr17:73344951]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73341880 73345223 TCF7L2 GTRD no Colon (HCT116) 21787778
chr17 73341880 73345223 TCF7L2 GTRD no Colon (HCT116) 108294077
chr17 73341888 73345087 TCF7L2 GTRD no Colon (HCT116) 21787779
chr17 73341888 73345087 TCF7L2 GTRD no Colon (HCT116) 108294078
chr17 73344942 73344952 RUNX3 JASPAR yes 55946353
chr17 73344943 73344952 RUNX2 JASPAR yes 55946354
Genes associated with rs563516190[chr17:73344951], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More