EnhancerDB
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  3. rs563516989[chr12:125330083]
Enhancers that have rs563516989[chr12:125330083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125303965 125343315 enh2677
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563516989[chr12:125330083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125330070 125330085 MEF2C JASPAR yes 124426207
chr12 125330071 125330085 POU4F1 JASPAR yes 124426208
chr12 125330071 125330086 MEF2A JASPAR yes 124426209
chr12 125330072 125330084 MEF2D JASPAR yes 124426210
chr12 125330078 125330093 MEF2C JASPAR yes 124426211
chr12 125330078 125330099 IRF1 JASPAR yes 124426212
chr12 125330079 125330094 FOXP1 JASPAR yes 124426213
chr12 125330079 125330100 IRF1 JASPAR yes 124426214
chr12 125330080 125330095 FOXP1 JASPAR yes 124426215
chr12 125330081 125330096 FOXP1 JASPAR yes 124426216
chr12 125330081 125330102 IRF1 JASPAR yes 124426217
chr12 125330082 125330097 FOXP1 JASPAR yes 124426218
chr12 125330083 125330098 FOXP1 JASPAR yes 124426219
chr12 125330083 125330104 IRF1 JASPAR yes 124426220
Genes associated with rs563516989[chr12:125330083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More