EnhancerDB
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  3. rs563519172[chr1:45176297]
Enhancers that have rs563519172[chr1:45176297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45170697 45189455 enh312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs563519172[chr1:45176297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45176279 45176300 IRF1 JASPAR yes 28575711
chr1 45176280 45176301 IRF1 JASPAR yes 28575713
chr1 45176281 45176302 IRF1 JASPAR yes 28575715
chr1 45176282 45176297 FOXP1 JASPAR yes 28575716
chr1 45176282 45176303 IRF1 JASPAR yes 28575717
chr1 45176283 45176298 FOXP1 JASPAR yes 28575718
chr1 45176283 45176304 IRF1 JASPAR yes 28575719
chr1 45176284 45176299 FOXP1 JASPAR yes 28575720
chr1 45176284 45176305 IRF1 JASPAR yes 28575721
chr1 45176285 45176300 FOXP1 JASPAR yes 28575722
chr1 45176285 45176306 IRF1 JASPAR yes 28575723
chr1 45176286 45176301 FOXP1 JASPAR yes 28575724
chr1 45176286 45176307 IRF1 JASPAR yes 28575725
chr1 45176287 45176302 FOXP1 JASPAR yes 28575726
chr1 45176289 45176304 FOXP1 JASPAR yes 28575727
chr1 45176290 45176311 IRF1 JASPAR yes 28575728
chr1 45176291 45176306 FOXP1 JASPAR yes 28575729
chr1 45176291 45176312 IRF1 JASPAR yes 28575730
chr1 45176295 45176316 IRF1 JASPAR yes 28575731
chr1 45176296 45176311 FOXP1 JASPAR yes 28575732
Genes associated with rs563519172[chr1:45176297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More