EnhancerDB
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  3. rs563539258[chr5:171378691]
Enhancers that have rs563539258[chr5:171378691]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs563539258[chr5:171378691]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171378682 171378695 NFKB1 JASPAR yes 67749544
chr5 171378682 171378695 NFKB2 JASPAR yes 67749545
chr5 171378685 171378696 CEBPB JASPAR yes 67749546
chr5 171378688 171378700 YY1 JASPAR yes 67749547
Genes associated with rs563539258[chr5:171378691], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More