EnhancerDB
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  3. rs563612502[chr6:107190172]
Enhancers that have rs563612502[chr6:107190172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs563612502[chr6:107190172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107190159 107190174 MEF2C JASPAR yes 104064994
chr6 107190160 107190175 MEF2A JASPAR yes 104064995
chr6 107190161 107190173 MEF2A JASPAR yes 104064996
chr6 107190161 107190173 MEF2B JASPAR yes 104064997
chr6 107190161 107190173 MEF2D JASPAR yes 104064998
Genes associated with rs563612502[chr6:107190172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More