EnhancerDB
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  3. rs563620773[chr17:62972872]
Enhancers that have rs563620773[chr17:62972872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563620773[chr17:62972872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62972657 62972897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780705
chr17 62972692 62973606 ZBTB33 GTRD no Lung (A549) 21780706
chr17 62972785 62973456 ZBTB33 GTRD no Brain (SK-N-SH) 21780707
chr17 62972855 62973278 ZNF274 GTRD no Bone Marrow (K562) 21780708
chr17 62972863 62972881 SRF JASPAR yes 55333970
chr17 62972869 62972873 YY1 TRANSFAC yes 55333971
Genes associated with rs563620773[chr17:62972872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More