EnhancerDB
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  3. rs563628707[chr12:116946224]
Enhancers that have rs563628707[chr12:116946224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr12 116946088 116946451 vista15033
VISTA
Transcript factors that have rs563628707[chr12:116946224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116945984 116946354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577139
chr12 116945984 116946354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061712
chr12 116946052 116946508 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577140
chr12 116946052 116946508 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061713
chr12 116946086 116946756 POLR2A UCSC Txn Factor no Conserved 108061714
chr12 116946086 116946756 POLR2A UCSC Txn Factor no Conserved 108061715
chr12 116946154 116946395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577141
chr12 116946154 116946395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061716
chr12 116946191 116946501 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108061717
chr12 116946221 116946231 SP1 JASPAR yes 82483815
chr12 116946221 116946231 SP1 JASPAR yes 124004578
chr12 116946222 116946230 SP1 TRANSFAC yes 82483816
chr12 116946222 116946230 SP1 TRANSFAC yes 124004579
chr12 116946222 116946231 SP1 TRANSFAC yes 82483817
chr12 116946222 116946231 SP1 TRANSFAC yes 124004580
chr12 116946223 116946228 SP1 TRANSFAC yes 82483818
chr12 116946223 116946228 SP1 TRANSFAC yes 124004581
chr12 116946224 116946229 SP1 TRANSFAC yes 82483819
chr12 116946224 116946229 SP1 TRANSFAC yes 124004582
chr12 116946224 116946230 SP1 TRANSFAC yes 82483820
chr12 116946224 116946230 SP1 TRANSFAC yes 124004583
chr12 116946224 116946647 ZBTB33 GTRD no Lung (A549) 108061718
Genes associated with rs563628707[chr12:116946224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More