EnhancerDB
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  3. rs563725420[chr17:25902768]
Enhancers that have rs563725420[chr17:25902768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs563725420[chr17:25902768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25902126 25902778 STAT1 UCSC Txn Factor no Conserved 108245767
chr17 25902302 25902778 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21748188
chr17 25902302 25902778 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245774
chr17 25902445 25902805 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21748189
chr17 25902445 25902805 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245775
chr17 25902475 25902851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21748190
chr17 25902475 25902851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245776
chr17 25902511 25903061 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21748191
chr17 25902511 25903061 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245777
chr17 25902603 25902947 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21748192
chr17 25902603 25902947 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245778
chr17 25902758 25902773 NR2C2 JASPAR yes 53647636
chr17 25902764 25902780 E2F2 JASPAR yes 53647638
chr17 25902768 25902772 LFA1 TRANSFAC yes 53647639
Genes associated with rs563725420[chr17:25902768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More