EnhancerDB
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  3. rs563738300[chr2:38941404]
Enhancers that have rs563738300[chr2:38941404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs563738300[chr2:38941404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38941387 38941406 RFX2 JASPAR yes 73168838
chr2 38941394 38941407 TFAP2A JASPAR yes 73168839
chr2 38941399 38941404 SP1 TRANSFAC yes 73168840
chr2 38941399 38941410 E2F4 JASPAR yes 73168841
chr2 38941399 38941410 E2F6 JASPAR yes 73168842
chr2 38941400 38941405 SP1 TRANSFAC yes 73168843
Genes associated with rs563738300[chr2:38941404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More