EnhancerDB
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  3. rs563778131[chr1:27853493]
Enhancers that have rs563778131[chr1:27853493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27853337 27854089 vista918
VISTA
Transcript factors that have rs563778131[chr1:27853493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27853134 27853590 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802584
chr1 27853483 27853497 E2F7 JASPAR yes 27705244
chr1 27853483 27853497 E2F7 JASPAR yes 118257940
chr1 27853492 27853496 YY1 TRANSFAC yes 27705245
chr1 27853492 27853496 YY1 TRANSFAC yes 118257941
Genes associated with rs563778131[chr1:27853493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More