EnhancerDB
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  3. rs563806082[chr12:96842478]
Enhancers that have rs563806082[chr12:96842478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563806082[chr12:96842478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96841933 96842573 POLR2A UCSC Txn Factor no Conserved 108053414
chr12 96842106 96842502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567778
chr12 96842106 96842502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053418
chr12 96842186 96842516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567780
chr12 96842186 96842516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053420
chr12 96842461 96842481 RREB1 JASPAR yes 123072596
chr12 96842462 96842483 IRF1 JASPAR yes 123072597
chr12 96842463 96842478 FOXP1 JASPAR yes 123072599
chr12 96842466 96842478 IRF1 JASPAR yes 123072600
chr12 96842466 96842486 RREB1 JASPAR yes 123072601
chr12 96842467 96842488 IRF1 JASPAR yes 123072602
chr12 96842468 96842483 FOXP1 JASPAR yes 123072604
chr12 96842469 96842484 STAT2 JASPAR yes 123072605
chr12 96842471 96842483 IRF1 JASPAR yes 123072606
chr12 96842473 96842479 TCF4 TRANSFAC yes 123072607
chr12 96842473 96842488 FOXP1 JASPAR yes 123072608
chr12 96842474 96842485 FOXP2 JASPAR yes 123072609
chr12 96842474 96842486 FOXC2 JASPAR yes 123072610
Genes associated with rs563806082[chr12:96842478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More