EnhancerDB
  1. Home
  2. SNP
  3. rs563828989[chr6:25172487]
Enhancers that have rs563828989[chr6:25172487]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563828989[chr6:25172487]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25172478 25172493 HNF4A JASPAR yes 100831158
chr6 25172486 25172501 RFX5 JASPAR yes 100831159
Genes associated with rs563828989[chr6:25172487], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More