EnhancerDB
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  3. rs563857402[chr1:22258416]
Enhancers that have rs563857402[chr1:22258416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs563857402[chr1:22258416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22258406 22258424 ESR2 JASPAR yes 27333861
chr1 22258407 22258421 NR2F1 JASPAR yes 27333862
chr1 22258408 22258418 SP1 JASPAR yes 27333863
chr1 22258408 22258428 ESR1 JASPAR yes 27333864
chr1 22258412 22258430 ESR2 JASPAR yes 27333866
chr1 22258413 22258428 ESR2 JASPAR yes 27333867
chr1 22258414 22258419 SP1 TRANSFAC yes 27333868
chr1 22258415 22258429 NR2F1 JASPAR yes 27333869
Genes associated with rs563857402[chr1:22258416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More