EnhancerDB
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  3. rs563861539[chr6:111873714]
Enhancers that have rs563861539[chr6:111873714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 111871688 111876668 vista1487
VISTA
chr6 111873587 111873978 vista53136
VISTA
Transcript factors that have rs563861539[chr6:111873714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111872917 111873957 TCF7L2 UCSC Txn Factor no Conserved 107693959
chr6 111872917 111873957 TCF7L2 UCSC Txn Factor no Conserved 108541321
chr6 111873266 111874167 KAP1 UCSC Txn Factor no Conserved 107693960
chr6 111873266 111874167 KAP1 UCSC Txn Factor no Conserved 108541322
chr6 111873706 111873721 ZBTB33 JASPAR yes 22274936
chr6 111873706 111873721 ZBTB33 JASPAR yes 70418002
chr6 111873706 111873721 ZBTB33 JASPAR yes 104353399
chr6 111873711 111873722 E2F1 JASPAR yes 22274937
chr6 111873711 111873722 E2F1 JASPAR yes 70418003
chr6 111873711 111873722 E2F1 JASPAR yes 104353400
chr6 111873712 111873723 E2F4 JASPAR yes 22274938
chr6 111873712 111873723 E2F6 JASPAR yes 22274939
chr6 111873712 111873723 E2F4 JASPAR yes 70418004
chr6 111873712 111873723 E2F6 JASPAR yes 70418005
chr6 111873712 111873723 E2F4 JASPAR yes 104353401
chr6 111873712 111873723 E2F6 JASPAR yes 104353402
Genes associated with rs563861539[chr6:111873714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More