EnhancerDB
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  3. rs563890653[chr12:96804707]
Enhancers that have rs563890653[chr12:96804707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563890653[chr12:96804707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96804705 96804720 FOXP1 JASPAR yes 123067220
chr12 96804706 96804712 TBP TRANSFAC yes 123067221
chr12 96804706 96804721 FOXP1 JASPAR yes 123067222
chr12 96804706 96804727 IRF1 JASPAR yes 123067223
chr12 96804707 96804722 FOXP1 JASPAR yes 123067224
chr12 96804707 96804728 IRF1 JASPAR yes 123067225
Genes associated with rs563890653[chr12:96804707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More