EnhancerDB
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  3. rs563946579[chr11:61379000]
Enhancers that have rs563946579[chr11:61379000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61360185 61399298 enh13959
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs563946579[chr11:61379000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61377746 61379341 ZNF274 GTRD no Cervix (HeLa-S3) 21486437
chr11 61377817 61379563 TEF1 GTRD no Bone (Osteoblast) 21486438
chr11 61378436 61379314 ZNF143 GTRD no Epithelial (MCF-7) 21486439
chr11 61378452 61379284 ZNF143 GTRD no Epithelial (MCF-7) 21486440
chr11 61378458 61379358 ZNF143 GTRD no Epithelial (MCF-7) 21486441
chr11 61378477 61379274 ZNF274 GTRD no Cervix (HeLa-S3) 21486442
chr11 61378478 61379238 ZNF143 GTRD no Epithelial (MCF-7) 21486443
chr11 61378480 61379185 ZNF274 GTRD no Cervix (HeLa-S3) 21486444
chr11 61378483 61379141 ZNF274 GTRD no Cervix (HeLa-S3) 21486445
chr11 61378487 61379275 ZNF143 GTRD no Epithelial (MCF-7) 21486446
chr11 61378497 61379283 ZNF274 GTRD no Cervix (HeLa-S3) 21486447
chr11 61378501 61379262 ZNF274 GTRD no Cervix (HeLa-S3) 21486448
chr11 61378507 61379118 ZNF274 GTRD no Liver (HepG2) 21486449
chr11 61378510 61379261 ZNF274 GTRD no Liver (HepG2) 21486450
chr11 61378556 61379291 ZNF274 GTRD no Liver (HepG2) 21486451
chr11 61378567 61379178 ZNF143 GTRD no Epithelial (MCF-7) 21486452
chr11 61378568 61379190 ZNF274 GTRD no Cervix (HeLa-S3) 21486453
chr11 61378573 61379137 ZNF274 GTRD no Liver (HepG2) 21486455
chr11 61378573 61379282 ZNF274 GTRD no Cervix (HeLa-S3) 21486456
chr11 61378576 61379071 ZNF274 GTRD no Liver (HepG2) 21486457
chr11 61378578 61379170 ZNF274 GTRD no Cervix (HeLa-S3) 21486458
chr11 61378578 61379240 ZNF274 GTRD no Liver (HepG2) 21486459
chr11 61378589 61379197 ZNF143 GTRD no Epithelial (MCF-7) 21486460
chr11 61378598 61379027 ZNF274 GTRD no Liver (HepG2) 21486461
chr11 61378603 61379136 ZNF274 GTRD no Liver (HepG2) 21486462
chr11 61378606 61379018 ZNF274 GTRD no Liver (HepG2) 21486463
chr11 61378614 61379046 ZNF274 GTRD no Liver (HepG2) 21486464
chr11 61378615 61379042 ZNF274 GTRD no Liver (HepG2) 21486465
chr11 61378640 61379122 ZNF274 GTRD no Cervix (HeLa-S3) 21486466
chr11 61378645 61379201 ZNF274 GTRD no Liver (HepG2) 21486467
chr11 61378649 61379111 ZNF143 GTRD no Epithelial (MCF-7) 21486468
chr11 61378652 61379109 ZNF274 GTRD no Liver (HepG2) 21486469
chr11 61378653 61379126 ZNF274 GTRD no Liver (HepG2) 21486470
chr11 61378662 61379085 ZBTB33 GTRD no Brain (SK-N-SH) 21486471
chr11 61378670 61379112 ZNF143 GTRD no Epithelial (MCF-7) 21486472
chr11 61378676 61379160 ZNF143 GTRD no Epithelial (MCF-7) 21486473
chr11 61378687 61379092 ZNF274 GTRD no Cervix (HeLa-S3) 21486474
chr11 61378687 61379201 ZBTB33 GTRD no Brain (SK-N-SH) 21486475
chr11 61378690 61379051 ZNF274 GTRD no Liver (HepG2) 21486476
chr11 61378691 61379158 ZNF274 GTRD no Liver (HepG2) 21486477
chr11 61378692 61379182 ZNF274 GTRD no Liver (HepG2) 21486478
chr11 61378697 61379252 ZBTB33 GTRD no Brain (SK-N-SH) 21486479
chr11 61378704 61379120 ZNF143 GTRD no Epithelial (MCF-7) 21486480
chr11 61378704 61379143 ZNF274 GTRD no Liver (HepG2) 21486481
chr11 61378707 61379138 ZNF274 GTRD no Cervix (HeLa-S3) 21486482
chr11 61378713 61379149 ZNF274 GTRD no Liver (HepG2) 21486483
chr11 61378716 61379156 ZNF143 GTRD no Epithelial (MCF-7) 21486484
chr11 61378730 61379140 ZNF274 GTRD no Liver (HepG2) 21486485
chr11 61378739 61379213 TEF1 GTRD no Bone (Osteoblast) 21486486
chr11 61378745 61379171 ZNF274 GTRD no Liver (HepG2) 21486487
chr11 61378750 61379131 ZBTB33 GTRD no Brain (SK-N-SH) 21486488
chr11 61378774 61379133 ZNF274 GTRD no Liver (HepG2) 21486489
chr11 61378993 61379004 TFAP2A JASPAR yes 39151541
chr11 61378993 61379004 TFAP2B JASPAR yes 39151542
chr11 61378993 61379004 TFAP2C JASPAR yes 39151543
chr11 61378994 61379003 TFAP2A JASPAR yes 39151544
Genes associated with rs563946579[chr11:61379000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More