EnhancerDB
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  3. rs563980393[chr4:124269346]
Enhancers that have rs563980393[chr4:124269346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 124257965 124276915 enh37001
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Stomach Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs563980393[chr4:124269346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 124269325 124269346 IRF1 JASPAR yes 92531714
chr4 124269326 124269347 IRF1 JASPAR yes 92531716
chr4 124269327 124269348 IRF1 JASPAR yes 92531718
chr4 124269328 124269349 IRF1 JASPAR yes 92531720
chr4 124269331 124269346 FOXP1 JASPAR yes 92531722
chr4 124269342 124269348 GATA3 JASPAR yes 92531723
chr4 124269342 124269363 IRF1 JASPAR yes 92531724
chr4 124269343 124269358 FOXP1 JASPAR yes 92531725
chr4 124269346 124269360 STAT1 JASPAR yes 92531726
chr4 124269346 124269361 STAT2 JASPAR yes 92531727
Genes associated with rs563980393[chr4:124269346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More