EnhancerDB
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  3. rs563980739[chr2:216652885]
Enhancers that have rs563980739[chr2:216652885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216643265 216664715 enh19204
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs563980739[chr2:216652885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216652879 216652889 NFIA JASPAR yes 80807680
chr2 216652881 216652887 NFIC JASPAR yes 80807681
chr2 216652881 216652897 SOX4 JASPAR yes 80807682
chr2 216652882 216652897 SOX21 JASPAR yes 80807683
chr2 216652883 216652887 H1TF2 TRANSFAC yes 80807684
chr2 216652883 216652887 NFE TRANSFAC yes 80807685
chr2 216652883 216652887 SRF TRANSFAC yes 80807686
Genes associated with rs563980739[chr2:216652885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More