EnhancerDB
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  3. rs564009027[chr2:188404629]
Enhancers that have rs564009027[chr2:188404629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 188402465 188418715 enh19074
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Liver Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs564009027[chr2:188404629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 188404620 188404634 SPI1 JASPAR yes 79517985
chr2 188404620 188404641 IRF1 JASPAR yes 79517986
chr2 188404621 188404642 IRF1 JASPAR yes 79517987
chr2 188404622 188404643 IRF1 JASPAR yes 79517988
chr2 188404623 188404638 FOXP1 JASPAR yes 79517989
chr2 188404623 188404644 IRF1 JASPAR yes 79517990
chr2 188404624 188404645 IRF1 JASPAR yes 79517991
chr2 188404625 188404640 FOXP1 JASPAR yes 79517992
chr2 188404626 188404641 FOXP1 JASPAR yes 79517993
chr2 188404627 188404642 FOXP1 JASPAR yes 79517994
chr2 188404628 188404643 FOXP1 JASPAR yes 79517995
chr2 188404629 188404644 FOXP1 JASPAR yes 79517996
Genes associated with rs564009027[chr2:188404629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More