EnhancerDB
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  3. rs56402612[chr11:19972741]
Enhancers that have rs56402612[chr11:19972741]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56402612[chr11:19972741]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19972001 19973987 ZNF274 GTRD no Bone Marrow (K562) 107961389
chr11 19972320 19974903 ZNF274 GTRD no Bone Marrow (K562) 107961390
chr11 19972729 19972744 TFAP2A JASPAR yes 37818184
chr11 19972729 19972744 TFAP2C JASPAR yes 37818185
chr11 19972731 19972746 TFAP2A JASPAR yes 37818186
chr11 19972731 19972746 TFAP2C JASPAR yes 37818187
chr11 19972732 19972743 TFAP2A JASPAR yes 37818188
chr11 19972732 19972743 TFAP2B JASPAR yes 37818189
chr11 19972732 19972744 TFAP2A JASPAR yes 37818190
chr11 19972734 19972745 EBF1 JASPAR yes 37818191
Genes associated with rs56402612[chr11:19972741], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More