EnhancerDB
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  3. rs564039042[chr16:85544057]
Enhancers that have rs564039042[chr16:85544057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564039042[chr16:85544057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85543387 85545416 ZNF143 GTRD no Epithelial (MCF-7) 21726673
chr16 85543839 85545295 ZNF274 GTRD no Bone Marrow (K562) 21726674
chr16 85543943 85545299 TCF7L2 GTRD no Colon (HCT116) 21726675
chr16 85544040 85544060 RREB1 JASPAR yes 12069966
chr16 85544050 85544067 ESR1 JASPAR yes 12069967
chr16 85544051 85544071 ESR1 JASPAR yes 12069968
chr16 85544052 85544067 RUNX2 JASPAR yes 12069969
Genes associated with rs564039042[chr16:85544057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More