EnhancerDB
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  3. rs564087736[chr6:25002329]
Enhancers that have rs564087736[chr6:25002329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs564087736[chr6:25002329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25002320 25002334 TLX1 JASPAR yes 100811812
chr6 25002321 25002335 TLX1 JASPAR yes 100811813
chr6 25002329 25002340 CDX2 JASPAR yes 100811814
Genes associated with rs564087736[chr6:25002329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More