EnhancerDB
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  3. rs564154199[chr3:56958215]
Enhancers that have rs564154199[chr3:56958215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs564154199[chr3:56958215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56958211 56958219 TBX5 JASPAR yes 2611971
chr3 56958211 56958220 ZEB1 JASPAR yes 2611972
chr3 56958212 56958222 ID4 JASPAR yes 2611973
chr3 56958212 56958222 TCF3 JASPAR yes 2611974
chr3 56958212 56958222 TCF4 JASPAR yes 2611975
chr3 56958213 56958222 SNAI2 JASPAR yes 2611976
chr3 56958214 56958219 USF2 TRANSFAC yes 2611977
Genes associated with rs564154199[chr3:56958215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More