EnhancerDB
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  3. rs564167684[chr17:55499223]
Enhancers that have rs564167684[chr17:55499223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564167684[chr17:55499223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55499217 55499232 RUNX2 JASPAR yes 54953653
chr17 55499218 55499227 RUNX2 JASPAR yes 54953654
chr17 55499218 55499228 RUNX3 JASPAR yes 54953655
chr17 55499218 55499229 RUNX1 JASPAR yes 54953656
chr17 55499220 55499235 MEF2C JASPAR yes 54953657
chr17 55499221 55499236 MEF2A JASPAR yes 54953658
Genes associated with rs564167684[chr17:55499223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More