EnhancerDB
  1. Home
  2. SNP
  3. rs564202876[chr17:78723166]
Enhancers that have rs564202876[chr17:78723166]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs564202876[chr17:78723166]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 21797105
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307178
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307179
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 21797106
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 108307180
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 21797107
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 108307181
chr17 78723151 78723166 SCRT1 JASPAR yes 56274726
chr17 78723153 78723166 SCRT2 JASPAR yes 56274727
chr17 78723158 78723174 ZNF143 JASPAR yes 56274729
Genes associated with rs564202876[chr17:78723166], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More