EnhancerDB
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  3. rs564256554[chr1:8498860]
Enhancers that have rs564256554[chr1:8498860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564256554[chr1:8498860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8498370 8499364 AR GTRD no Prostate (PC-3) 21325215
chr1 8498370 8499364 AR GTRD no Prostate (PC-3) 107801976
chr1 8498839 8498860 IRF1 JASPAR yes 26554278
chr1 8498847 8498861 SPIC JASPAR yes 26554280
chr1 8498858 8498866 RHOXF1 JASPAR yes 26554281
Genes associated with rs564256554[chr1:8498860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More