EnhancerDB
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  3. rs564279996[chr3:57939661]
Enhancers that have rs564279996[chr3:57939661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57932901 57950075 enh20645
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564279996[chr3:57939661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57939653 57939668 ZIC4 JASPAR yes 2656907
chr3 57939654 57939668 ZIC1 JASPAR yes 2656908
chr3 57939659 57939672 NFKB1 JASPAR yes 2656909
chr3 57939659 57939672 NFKB2 JASPAR yes 2656910
Genes associated with rs564279996[chr3:57939661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More