EnhancerDB
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  3. rs564299747[chr19:2545489]
Enhancers that have rs564299747[chr19:2545489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564299747[chr19:2545489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361878
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361879
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361880
chr19 2543215 2545558 ZNF274 GTRD no Blood (GM12878) 108361911
chr19 2543215 2545558 ZNF274 GTRD no Blood (GM12878) 108361912
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361915
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361916
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361917
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361965
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361966
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361967
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361993
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361994
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361995
chr19 2545307 2545717 ZNF274 GTRD no Liver (HepG2) 21837065
chr19 2545307 2545717 ZNF274 GTRD no Liver (HepG2) 108362361
chr19 2545339 2545819 ZBTB33 GTRD no Lung (A549) 21837066
chr19 2545339 2545819 ZBTB33 GTRD no Lung (A549) 108362362
chr19 2545366 2545654 ZNF274 GTRD no Cervix (HeLa-S3) 21837067
chr19 2545366 2545654 ZNF274 GTRD no Cervix (HeLa-S3) 108362363
chr19 2545478 2545493 MEF2C JASPAR yes 112072565
chr19 2545478 2545499 IRF1 JASPAR yes 112072566
chr19 2545487 2545501 ONECUT1 JASPAR yes 112072568
chr19 2545487 2545501 ONECUT2 JASPAR yes 112072569
chr19 2545487 2545501 ONECUT3 JASPAR yes 112072570
chr19 2545488 2545500 IRF1 JASPAR yes 112072571
Genes associated with rs564299747[chr19:2545489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More