EnhancerDB
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  3. rs564322939[chr16:85589643]
Enhancers that have rs564322939[chr16:85589643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564322939[chr16:85589643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215987
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215988
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 21728824
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216104
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216105
chr16 85587373 85589674 ZNF274 GTRD no Bone Marrow (K562) 21728843
chr16 85587462 85591088 ZNF274 GTRD no Bone Marrow (K562) 21728847
chr16 85588349 85590205 ZNF274 GTRD no Bone Marrow (K562) 21728934
chr16 85588599 85589660 TCF7L2 GTRD no Colon (HCT116) 21728949
chr16 85588651 85589803 ZNF274 GTRD no Bone Marrow (K562) 21728956
chr16 85589177 85589687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729013
chr16 85589207 85591412 ZNF274 GTRD no Blood (GM12878) 108216124
chr16 85589355 85591118 ZNF274 GTRD no Cervix (HeLa-S3) 21729016
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 21729017
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 108216125
chr16 85589376 85589746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729018
chr16 85589396 85589786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729019
chr16 85589407 85590955 ZNF274 GTRD no Bone Marrow (K562) 21729020
chr16 85589421 85589945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729021
chr16 85589453 85590049 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21729022
chr16 85589459 85589963 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729023
chr16 85589471 85591222 ZNF274 GTRD no Bone Marrow (K562) 21729024
chr16 85589473 85589977 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21729025
chr16 85589489 85590755 ZNF274 GTRD no Bone Marrow (K562) 21729026
chr16 85589502 85589768 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729027
chr16 85589503 85590913 ZNF274 GTRD no Bone Marrow (K562) 21729028
chr16 85589505 85589881 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21729029
chr16 85589525 85590786 ZNF274 GTRD no Bone Marrow (K562) 21729030
chr16 85589535 85590242 ZNF274 GTRD no Bone Marrow (K562) 21729031
chr16 85589542 85590391 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21729032
chr16 85589582 85590079 ZNF274 GTRD no Bone Marrow (K562) 21729033
chr16 85589622 85590311 ZNF274 GTRD no Bone Marrow (K562) 21729034
chr16 85589634 85590304 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21729035
Genes associated with rs564322939[chr16:85589643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More