EnhancerDB
  1. Home
  2. SNP
  3. rs564324352[chr19:13952689]
Enhancers that have rs564324352[chr19:13952689]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564324352[chr19:13952689]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13951446 13952723 ZNF143 GTRD no Epithelial (MCF-7) 21851873
chr19 13951579 13953680 TCF7L2 GTRD no Colon (HCT116) 21851877
chr19 13951587 13952748 ZNF274 GTRD no Blood (GM12878) 21851878
chr19 13951621 13953056 ZNF274 GTRD no Bone Marrow (K562) 21851881
chr19 13951632 13952697 ZNF274 GTRD no Cervix (HeLa-S3) 21851882
chr19 13951634 13952759 ZNF274 GTRD no Bone Marrow (K562) 21851885
chr19 13951635 13954235 ZNF274 GTRD no Blood (GM12878) 21851886
chr19 13951637 13953815 ZNF274 GTRD no Bone Marrow (K562) 21851887
chr19 13951638 13952718 ZNF274 GTRD no Bone Marrow (K562) 21851888
chr19 13951640 13953891 ZNF274 GTRD no Cervix (HeLa-S3) 21851889
chr19 13951646 13953826 ZNF274 GTRD no Bone Marrow (K562) 21851890
chr19 13951652 13952803 ZNF274 GTRD no Blood (GM12878) 21851891
chr19 13951656 13952760 ZBTB33 GTRD no Brain (SK-N-SH) 21851892
chr19 13951668 13952890 ZNF274 GTRD no Bone Marrow (K562) 21851893
chr19 13951679 13953534 ZNF274 GTRD no Blood (GM12878) 21851895
chr19 13951680 13952728 ZNF274 GTRD no Blood (GM12878) 21851896
chr19 13951684 13953486 ZNF274 GTRD no Blood (GM12878) 21851897
chr19 13951700 13952727 ZBTB33 GTRD no Brain (SK-N-SH) 21851898
chr19 13951712 13953059 ZNF143 GTRD no Epithelial (MCF-7) 21851899
chr19 13951728 13952861 ZBTB33 GTRD no Brain (SK-N-SH) 21851901
chr19 13951731 13952879 ZBTB33 GTRD no Brain (SK-N-SH) 21851902
chr19 13951732 13952870 ZNF274 GTRD no Blood (GM12878) 21851903
chr19 13951746 13952747 ZNF274 GTRD no Blood (GM12878) 21851904
chr19 13951746 13952767 ZBTB33 GTRD no Brain (SK-N-SH) 21851905
chr19 13951752 13952873 ZNF274 GTRD no Liver (HepG2) 21851906
chr19 13951771 13952816 ZNF274 GTRD no Blood (GM12878) 21851909
chr19 13951772 13953797 ZNF274 GTRD no Bone Marrow (K562) 21851910
chr19 13951777 13952720 ZNF274 GTRD no Bone Marrow (K562) 21851912
chr19 13951777 13952867 ZBTB33 GTRD no Brain (SK-N-SH) 21851913
chr19 13951778 13952866 ZNF274 GTRD no Bone Marrow (K562) 21851915
chr19 13951778 13952882 ZNF274 GTRD no Bone Marrow (K562) 21851916
chr19 13951784 13952739 ZNF274 GTRD no Liver (HepG2) 21851917
chr19 13951786 13952739 ZNF274 GTRD no Cervix (HeLa-S3) 21851918
chr19 13951789 13952856 ZNF274 GTRD no Blood (GM12878) 21851919
chr19 13951793 13952776 ZNF274 GTRD no Blood (GM12878) 21851920
chr19 13951794 13953699 ZNF274 GTRD no Bone Marrow (K562) 21851921
chr19 13951797 13952781 ZNF143 GTRD no Epithelial (MCF-7) 21851922
chr19 13951800 13952764 ZNF274 GTRD no Blood (GM12878) 21851923
chr19 13951801 13952909 ZNF274 GTRD no Liver (HepG2) 21851924
chr19 13951802 13952761 ZNF274 GTRD no Liver (HepG2) 21851925
chr19 13951808 13952697 ZNF274 GTRD no Cervix (HeLa-S3) 21851926
chr19 13951814 13952865 ZNF143 GTRD no Epithelial (MCF-7) 21851927
chr19 13951821 13952852 ZNF143 GTRD no Epithelial (MCF-7) 21851928
chr19 13951823 13953780 ZNF274 GTRD no Bone Marrow (K562) 21851929
chr19 13951829 13952701 ZNF274 GTRD no Blood (GM12878) 21851930
chr19 13951829 13952822 ZNF274 GTRD no Blood (GM12878) 21851931
chr19 13951830 13952879 ZNF274 GTRD no Liver (HepG2) 21851932
chr19 13951831 13952713 ZNF274 GTRD no Bone Marrow (K562) 21851933
chr19 13951831 13952863 ZNF274 GTRD no Bone Marrow (K562) 21851934
chr19 13951831 13953250 TCF7L2 GTRD no Colon (HCT116) 21851935
chr19 13951835 13952739 ZNF274 GTRD no Blood (GM12878) 21851936
chr19 13951838 13952762 ZNF274 GTRD no Liver (HepG2) 21851937
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 21851938
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 108390135
chr19 13951839 13952938 ZNF143 GTRD no Epithelial (MCF-7) 21851939
chr19 13951847 13952732 ZNF274 GTRD no Liver (HepG2) 21851942
chr19 13951854 13953700 TCF7L2 GTRD no Colon (HCT116) 21851944
chr19 13951859 13952721 ZNF274 GTRD no Cervix (HeLa-S3) 21851945
chr19 13951861 13952862 ZNF274 GTRD no Bone Marrow (K562) 21851947
chr19 13951862 13952849 ZNF274 GTRD no Bone Marrow (K562) 21851949
chr19 13951866 13952781 ZNF274 GTRD no Liver (HepG2) 21851950
chr19 13951871 13953162 TCF7L2 GTRD no Colon (HCT116) 21851951
chr19 13951874 13952745 ZNF274 GTRD no Liver (HepG2) 21851952
chr19 13951875 13952760 ZNF143 GTRD no Epithelial (MCF-7) 21851953
chr19 13951878 13952690 ZNF274 GTRD no Bone Marrow (K562) 21851954
chr19 13951878 13952871 ZBTB33 GTRD no Brain (SK-N-SH) 21851955
chr19 13951884 13952850 ZNF274 GTRD no Liver (HepG2) 21851956
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 21851957
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 108390136
chr19 13951888 13952809 ZNF274 GTRD no Liver (HepG2) 21851958
chr19 13951891 13952839 ZNF274 GTRD no Bone Marrow (K562) 21851959
chr19 13951891 13952888 ZNF274 GTRD no Blood (GM12878) 21851960
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 21851961
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 108390137
chr19 13951894 13952846 ZNF274 GTRD no Blood (GM12878) 21851962
chr19 13951898 13952862 ZNF143 GTRD no Epithelial (MCF-7) 21851963
chr19 13951899 13952744 ZNF274 GTRD no Liver (HepG2) 21851964
chr19 13951899 13952900 ZNF274 GTRD no Blood (GM12878) 21851965
chr19 13951913 13952759 ZBTB33 GTRD no Brain (SK-N-SH) 21851966
chr19 13951915 13952793 ZNF274 GTRD no Liver (HepG2) 21851967
chr19 13951917 13953672 ZNF274 GTRD no Bone Marrow (K562) 21851968
chr19 13951921 13952721 ZNF274 GTRD no Cervix (HeLa-S3) 21851969
chr19 13951921 13952779 ZNF274 GTRD no Liver (HepG2) 21851970
chr19 13951922 13952853 ZNF274 GTRD no Liver (HepG2) 21851971
chr19 13951927 13952725 ZNF143 GTRD no Epithelial (MCF-7) 21851973
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 21851976
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 108390138
chr19 13951937 13952741 ZNF274 GTRD no Bone Marrow (K562) 21851977
chr19 13951942 13952818 ZNF274 GTRD no Liver (HepG2) 21851978
chr19 13951943 13952818 ZNF274 GTRD no Bone Marrow (K562) 21851979
chr19 13951953 13952891 ZNF274 GTRD no Bone Marrow (K562) 21851980
chr19 13951959 13952888 ZNF274 GTRD no Blood (GM12878) 21851982
chr19 13951965 13952849 ZNF274 GTRD no Blood (GM12878) 21851983
chr19 13951967 13952702 ZNF274 GTRD no Blood (GM12878) 21851985
chr19 13951967 13952753 ZNF274 GTRD no Liver (HepG2) 21851986
chr19 13951984 13952888 ZNF274 GTRD no Liver (HepG2) 21851990
chr19 13951988 13952800 ZNF274 GTRD no Bone Marrow (K562) 21851991
chr19 13951989 13952729 ZNF274 GTRD no Cervix (HeLa-S3) 21851994
chr19 13951996 13952773 ZNF274 GTRD no Bone Marrow (K562) 21851995
chr19 13952007 13952807 ZNF143 GTRD no Epithelial (MCF-7) 21851997
chr19 13952015 13952725 ZNF274 GTRD no Liver (HepG2) 21852001
chr19 13952016 13952845 ZNF274 GTRD no Liver (HepG2) 21852002
chr19 13952017 13952833 ZNF274 GTRD no Cervix (HeLa-S3) 21852003
chr19 13952024 13952778 ZNF274 GTRD no Cervix (HeLa-S3) 21852004
chr19 13952026 13952831 ZBTB33 GTRD no Brain (SK-N-SH) 21852005
chr19 13952028 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852006
chr19 13952033 13952827 ZNF274 GTRD no Liver (HepG2) 21852007
chr19 13952048 13952738 ZNF274 GTRD no Blood (GM12878) 21852010
chr19 13952050 13952725 ZNF274 GTRD no Blood (GM12878) 21852011
chr19 13952050 13952727 ZNF274 GTRD no Bone Marrow (K562) 21852012
chr19 13952061 13952738 ZNF274 GTRD no Cervix (HeLa-S3) 21852016
chr19 13952084 13952741 ZNF274 GTRD no Blood (GM12878) 21852021
chr19 13952093 13952838 ZNF274 GTRD no Liver (HepG2) 21852023
chr19 13952096 13952739 ZNF274 GTRD no Liver (HepG2) 21852024
chr19 13952102 13952739 ZNF274 GTRD no Liver (HepG2) 21852025
chr19 13952106 13952851 ZNF143 GTRD no Epithelial (MCF-7) 21852026
chr19 13952122 13953921 ZNF143 GTRD no Epithelial (MCF-7) 21852032
chr19 13952124 13952704 ZNF274 GTRD no Liver (HepG2) 21852033
chr19 13952161 13952737 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852037
chr19 13952173 13952749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852038
chr19 13952173 13952764 ZNF274 GTRD no Liver (HepG2) 21852039
chr19 13952176 13952813 ZNF274 GTRD no Bone Marrow (K562) 21852040
chr19 13952178 13952708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852041
chr19 13952186 13952702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852044
chr19 13952189 13952842 ZNF274 GTRD no Cervix (HeLa-S3) 21852045
chr19 13952190 13952707 ZNF274 GTRD no Blood (GM12878) 21852046
chr19 13952192 13952889 ZNF274 GTRD no Bone Marrow (K562) 21852048
chr19 13952209 13952823 ZNF274 GTRD no Bone Marrow (K562) 21852050
chr19 13952213 13953203 TCF7L2 GTRD no Colon (HCT116) 21852051
chr19 13952225 13952935 ERG GTRD no Prostate (RWPE1) 21852053
chr19 13952235 13952759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852054
chr19 13952243 13952774 ZNF143 GTRD no Epithelial (MCF-7) 21852055
chr19 13952247 13952935 TCF7L2 GTRD no Colon (HCT116) 21852056
chr19 13952258 13952755 ZNF274 GTRD no Blood (GM12878) 21852057
chr19 13952265 13952737 ZNF274 GTRD no Bone Marrow (K562) 21852058
chr19 13952304 13952711 ZNF274 GTRD no Bone Marrow (K562) 21852061
chr19 13952308 13952742 ZNF143 GTRD no Epithelial (MCF-7) 21852062
chr19 13952309 13952813 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852063
chr19 13952310 13952760 ZNF274 GTRD no Blood (GM12878) 21852064
chr19 13952314 13952766 ZNF274 GTRD no Blood (GM12878) 21852065
chr19 13952367 13952742 ZNF274 GTRD no Bone Marrow (K562) 21852069
chr19 13952371 13952708 ZNF274 GTRD no Bone Marrow (K562) 21852070
chr19 13952421 13952768 ZNF274 GTRD no Blood (GM12878) 21852072
chr19 13952446 13952991 TCF7L2 GTRD no Colon (HCT116) 21852073
chr19 13952450 13952748 ZNF274 GTRD no Blood (GM12878) 21852074
chr19 13952455 13953659 ZNF274 GTRD no Bone Marrow (K562) 21852075
chr19 13952498 13952902 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852076
chr19 13952518 13953362 TCF7L2 GTRD no Colon (HCT116) 21852077
chr19 13952522 13952738 ZNF274 GTRD no Bone Marrow (K562) 21852078
chr19 13952677 13952689 INSM1 JASPAR yes 112536959
chr19 13952683 13952703 TP63 JASPAR yes 112536961
Genes associated with rs564324352[chr19:13952689], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More